MOESM2 of Quantitative proteomic analysis of pancreatic cyst fluid proteins associated with malignancy in intraductal papillary mucinous neoplasms

Additional file 2. Table S1. List of identified proteins. MS information on identified and quantitated proteins is listed consecutively. SignalP and SecretomeP were used to identify the secreted proteins, whereas TMHMM was used to identify transmembrane proteins. The Human Plasma Proteome Database confirmed the association between the proteins that were identified in human plasma and the identified proteins of this study. Identified proteins in our dataset were crossreferenced with pancreatic expression in the Human Protein Atlas. LFQ intensities of individual samples were used for further statistical analysis. The additional proteins searched exclusively in the presence of peptide library were highlighted as the additional column in this table.

附加文件2：表S1 已鉴定蛋白质列表。已鉴定与定量蛋白质的质谱（Mass Spectrometry, MS）信息按顺序依次列出。本研究采用SignalP与SecretomeP工具鉴定分泌蛋白，采用TMHMM工具鉴定跨膜蛋白。人类血浆蛋白质组数据库（Human Plasma Proteome Database）确认了本研究鉴定的蛋白质与人血浆中已鉴定蛋白质之间的关联。本数据集的已鉴定蛋白质与人类蛋白质图谱（Human Protein Atlas）中的胰腺组织表达数据进行了交叉比对。各样本的无标记定量（Label-Free Quantitation, LFQ）强度值被用于后续统计分析。仅在肽库存在条件下检索到的额外蛋白质，已在本表中以附加列形式标注。