Input data for DROMA_DB
收藏Zenodo2026-02-06 更新2026-05-26 收录
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https://zenodo.org/doi/10.5281/zenodo.15497674
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资源简介：
Input data made from: mugpeng/DROMA_DB: Sqlite db and DromaSet obj for Drug Response Omics association MAp. (DROMA)
Use the database and relavent package from: mugpeng/DROMA_Set: DROMASet is a comprehensive R package for managing and analyzing drug response and omics data across multiple projects. It provides a robust framework for handling complex multi-omics datasets with integrated drug sensitivity information, enabling seamless cross-project comparisons and analyses.
droma.sqlite includes:
project_name
dataset_type
data_types
sample_count
drug_count
CCLE
CellLine
cnv,drug,fusion,mRNA,meth,mutation_gene,mutation_site,proteinms,proteinrppa
1489
24
CTRP1
CellLine
drug
241
354
CTRP2
CellLine
drug
832
481
FIMM
CellLine
drug
50
52
GDSC1
CellLine
drug
988
304
GDSC2
CellLine
drug
810
169
GDSC
CellLine
cnv,mRNA,mutation_gene,mutation_site
1024
0
GRAY
CellLine
drug
71
106
NCI60
CellLine
drug,mRNA
162
54773
PDTXBreast
PDC
drug
37
98
Prism
CellLine
drug
480
1448
Tavor
PDC
drug,mRNA
53
46
UHNBreast
CellLine
drug
57
8
UMPDO1
PDO
drug,mRNA
112
49
UMPDO2
PDO
drug,mRNA
39
49
UMPDO3
PDO
drug,mRNA
42
48
Xeva
PDX
cnv,drug,mRNA,mutation_gene
268
38
gCSI
CellLine
cnv,drug,mutation_gene
581
44
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Zenodo创建时间：
2025-05-23
