Divergence time estimation of HPV16 variant lineages.

NIAID Data Ecosystem2026-03-10 收录

HPV16变异

分子钟分析

数据链接：

https://figshare.com/articles/dataset/Divergence_time_estimation_of_HPV16_variant_lineages_/7289588 数据链接链接失效反馈

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资源简介：

Divergence time estimation of HPV16 variant lineages.

创建时间：

2018-11-01

plastid245_beast_1

生物进化

分子钟分析

This file contains the consensus tree inferred on plastid markers by BEAST with the topology fixed. External calibration only was used. Each time unit corresponds to 20 million years.

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Posterior estimates of divergence times with the >65 Ma constraint to the Zea/Oryza separation.

分子钟分析

植物系统发育

MCMCTREE in PAML [19] was used with the GTR+Γ5 model. Shape and scale parameters, α and β, in the gamma prior for parameter σ2 were 1.0 and 10.0, respectively. 95% highest posterior density (HPD) is s

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Data from: Tree imbalance causes a bias in phylogenetic estimation of evolutionary timescales using heterochronous sequences

系统发育学

分子钟分析

Phylogenetic estimation of evolutionary timescales has become routine in biology, forming the basis of a wide range of evolutionary and ecological studies. However, there are various sources of bias t

DataONE2014-11-26 更新70

Phylogenomic analyses of echinoid diversification prompt a re-evaluation of their fossil record

系统发育基因组学

分子钟分析

Echinoids are key components of modern marine ecosystems. Despite a remarkable fossil record, the emergence of their crown group is documented by few specimens of unclear affinities, rendering their e

DataONE2022-05-18 更新80

Old world quail time-calibrated MCMCtree output, scale in tens of millions of years.

系统发育时间标定

分子钟分析

Output tree from MCMCtree time-calibration analysis

NIAID Data Ecosystem70