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R script files that are referred to in Unbiased Sampling and Volume-Sorting of Origin-Specific Terminals Using SBEM Image Stacks by Erisir, Briegel, Maher, and Sciaccotta, 202

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DataCite Commons2025-03-26 更新2024-07-13 收录
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https://dataverse.lib.virginia.edu/citation?persistentId=doi:10.18130/V3/9VXAZ7
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资源简介:
This dataset contains R Script files used in the Volumetric Sorting method described in Erisir et al., 202x [citation in progress]. A sample data file and a README file are also included. MClust_Volume_Sorting.R organizes a data file that is similar in structure to the sample file and runs mclust analysis to identify terminal subpopulations, the volumes of which are measured via 3D reconstructions using Scanning Blockface Electron Microscopy image stacks. MonteCarlo_VolumeSortingCutoffs.R simulates the subpopulation parameters to identify generalizable cutoff volumes.

本数据集包含Erisir等人202x年(引用待完成)的研究中所述体积分选法(Volumetric Sorting)所使用的R脚本文件,同时附带示例数据文件与README文件。其中,MClust_Volume_Sorting.R可对结构与示例文件相近的数据文件进行整理,并运行mclust聚类分析以识别终端亚群(terminal subpopulations),该亚群的体积通过扫描块面电子显微镜(Scanning Blockface Electron Microscopy)图像栈的三维重建进行测算。MonteCarlo_VolumeSortingCutoffs.R则通过模拟亚群参数,以确定可推广的体积阈值。
提供机构:
University of Virginia Dataverse
创建时间:
2023-08-08
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