Bakta database

This data repository contains the mandatory DB for Bakta (db.tar.gz). Bakta is a tool for the rapid &amp; standardized local annotation of bacterial genomes &amp; plasmids. It provides <strong>dbxref</strong>-rich and <strong>sORF</strong>-including annotations in machine-readble <code>JSON</code> &amp; bioinformatics standard file formats for automatic downstream analysis: https://github.com/oschwengers/bakta This db provides protein sequence hash digests and lengths of UniProt's UniRef100/UniRef90 clusters for ultra-fast identification &amp; lookups. It has been pre-annotated with several specialized db and enriched with Dbxrefs. All conducted pre-annotations are logged and provided in the db.log.gz file. External db used &amp; versions: Rfam: 14.3 UniProtKB/Swiss-Prot: 2020_05 RefSeq: r202 NCBI AMRFinderPlus: 2020-11-09.1 COG: 2020 ISFinder: 2019-09-25 Mob-suite: 2.0 DoriC: 10 Pfam: 33.1<br>