Additional file 2: of Association of bovine major histocompatibility complex (BoLA) gene polymorphism with colostrum and milk microbiota of dairy cows during the first week of lactation

Table S1. Summary statistics for comparison of alpha-diversity of microbial communities. Table S2. Summary statistics for comparison of beta-diversity of microbial communities (PERMANOVA test statistics). Table S3. Summary statistics for repeated measurement analysis of bacterial communities. Table S4. Summary statistics for repeated measurement analysis of fungal communities. Table S5. NCBI blastn search result for selected bacterial OTUs. Table S6. Primer design and equences for barcoded PCR amplification of the V1-V2 regions of bacterial 16S rRNA genes. Table S7. Primer design and sequences for barcoded PCR amplification of the ITS2 of the eukaryotic ribosomal genes. Table S8. Metadata used for processing of 16S rRNA gene raw sequences, bioinformatics and statistical analyses of bacterial communities. Table S9. Metadata used for processing of ITS2 raw sequences, bioinformatics and statistical analyses of fungal communities. (XLSX 48Â kb)

表S1 微生物群落α多样性（alpha-diversity）比较汇总统计量。表S2 微生物群落β多样性（beta-diversity）比较汇总统计量（置换多元方差分析（PERMANOVA）检验统计量）。表S3 细菌群落重复测量分析汇总统计量。表S4 真菌群落重复测量分析汇总统计量。表S5 筛选出的细菌操作分类单元（OTUs）的NCBI blastn搜索结果。表S6 细菌16S rRNA基因V1-V2可变区带条形码PCR扩增的引物设计与序列。表S7 真核生物核糖体基因ITS2（内转录间隔区2）区带条形码PCR扩增的引物设计与序列。表S8 用于细菌群落16S rRNA基因原始序列处理、生物信息学及统计分析的元数据（metadata）。表S9 用于真菌群落ITS2原始序列处理、生物信息学及统计分析的元数据（metadata）。（XLSX格式，文件大小48千字节）