Additional file 2 of Mapping and functional characterization of structural variation in 1060 pig genomes

Additional file 2: Table S1. Non-redundant SV statistics for sub-populations. Table S2. SV statistics for individuals. Table S3. SV list. Table S4. Overlaps between WGS SVs derived from 30 Meishan pigs and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S5. Summary statistics of overlapping rate between Meishan WGS SV and SVs derived from long-read-based assembly comparison of MSCAAS v1 and Sscrofa11.1. Table S6. Statistics of SVs overlapped by repeats. Table S7. GO enrichment results of total SV overlapped genes. Table S8. GO enrichment results of singleton SV overlapped genes. Table S9. Summary Statistics of SVs overlapped by protein coding genes. Table S10. Categories of gene-overlapping SVs. Table S11. Proportions of SVs overlapped by various chromatin states for tissues. Table S12. Proportions of singleton SVs overlapped by various chromatin states for tissues.