Additional file 2 of Jasmonates and Histone deacetylase 6 activate Arabidopsis genome-wide histone acetylation and methylation during the early acute stress response
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Additional file 2: Table S1. Distribution of histone modification-associated peaks across genomic regions. Table S2. Differential enrichment (fold change) of histone modification-associated peak summits in condition of interest compared to untreated WT. Table S3. Overlap of AGIs enriched in H4ac and H3K27me3 in axe1-5 with H3ac, H3K4me2 and HDA6 ChIP-Seq by Hung et al. (2019; 2020). Table S4. List of Gene Ontology terms overrepresented by AGIs associated with H4ac or H3K27me3. Table S5. Overrepresentation of transposable element superfamilies in H4ac- and H3K27me3-associated loci. Table S6. Overrepresentation of transcription factor families in H4ac- and H3K27me3-associated AGIs.
附加文件2:
表S1:组蛋白修饰相关峰在基因组区域中的分布情况。
表S2:目标处理条件下,组蛋白修饰相关峰顶点的富集差异(倍数变化),与未处理野生型样本的对比结果。
表S3:axe1-5突变体中富集于H4ac和H3K27me3的AGI(Arabidopsis Gene Identifier),与Hung等人(2019;2020)发表的H3ac、H3K4me2及HDA6染色质免疫共沉淀测序(ChIP-Seq)数据的重叠情况。
表S4:与H4ac或H3K27me3相关的AGI所显著富集的基因本体论(GO)术语列表。
表S5:H4ac和H3K27me3相关基因座中转座因子超家族的显著富集情况。
表S6:H4ac和H3K27me3相关AGI中转录因子家族的显著富集情况。
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figshare
创建时间:
2022-04-12



