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Additional file 7 of Competition-cooperation in the chemoautotrophic ecosystem of Movile Cave: first metagenomic approach on sediments

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Additional file 7. Table S15 MEMOTE [42] test results regarding the potential of gap-fill models (metaGEMs) initialized for the minimal medium to produce biomass (growth). The biomass production potential is indicated by the biomass production values > 0. Table S16The competition (given by MRO score) and cooperation (given by MIP score) potential for the community in each sample, predicted by SMETANA [43]. Table S17 The MAGs that interact in SMETANA simulation for the microbial community in the lower galleries. Table S18 The MAGs that interact in SMETANA simulation for the microbial community in the upper galleries. Table S19 Compounds exchanged that differed between upper and lower galleries according to Wilcoxon rank-sum test.

补充材料7。表S15:MEMOTE[42]针对以最小培养基初始化的缺口填补模型(metaGEMs)实现生物量合成(生长)的潜力所得的测试结果。生物量合成潜力以生物量合成值>0作为判定依据。表S16:由SMETANA[43]预测的各样本中微生物群落的竞争(以MRO评分表征)与协作(以MIP评分表征)潜力。表S17:针对下层廊道微生物群落,在SMETANA模拟中存在相互作用的宏基因组组装基因组(Metagenome-Assembled Genomes,MAGs)。表S18:针对上层廊道微生物群落,在SMETANA模拟中存在相互作用的MAGs。表S19:经Wilcoxon秩和检验,上层与下层廊道间存在差异的交换代谢物。
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2022-08-18
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