five

RNA sequences amplified from a HBV-genome-encoding plasmid

收藏
NIAID Data Ecosystem2026-03-14 收录
下载链接:
https://www.ncbi.nlm.nih.gov/sra/SRP395060
下载链接
链接失效反馈
官方服务:
资源简介:
We collected sequences amplified from three HBV-genome-encoding plasmids, one wild type and two with predefined point mutations. Overall design: The data was generated to validate a variant-calling strategy of HBV genomes based on RNA-sequencing data. We cloned part of HBV genome into a commercially available plasmid. We introduced predefined point mutations for benchmarking purposes, and validated them. Wild-type- and mutant-containing plasmids were mixed in pre-defined proportions and amplified to generate HBV transcripts. We applied RNA-sequencing, generated reads, and used the software *HBVouroboros* that we developed to perform de-novo assembly of the genome and variant calling. The results demonstrate that the RNA-sequencing + HBVourboros approach recalls HBV genomic variants with high fidelity.
创建时间:
2022-09-17
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作