Table 6 in A revised taxonomy and phylogeny of opalinids (Stramenopiles: Opalinata) inferred from the analysis of complete nuclear ribosomal DNA genes

Table 6. Number and proportion of shared short tandem repeats (STRs) in the rDNA of opalinids. For each species* the total number of STRs (T) and the proportion of STRs species specific (not shared with other sequences) (S)* STRs shared by species of the same genus (G)* and STRs shared by species of different genera (C) are given. Incomplete sequences (those lacking ≥100 bases at the 3 ʹ or 5 ʹ end) are shown in parentheses. Abbreviation: N/A* sequence not available.
SpeciesSSU rDNAITS15.8S rDNAITS2LSU rDNATSGCTSGCTSGCTSGCTSGCOPALINIDA(Protoopalina axonucleata)4513.335.651.1N/AN/AN/AN/A(Protoopalina intestinalis)5211.538.550.0N/AN/AN/AN/AProtoopalina limnocharis6814.729.455.91931.668.4050.020.080.01625.075.00.01773.447.549.1Protoopalina pingi6814.729.455.92035.065.0050.020.080.01520.080.00.01794.546.948.6Zelleriella orientalis950.041.059.0220.095.54.590.033.366.7230.091.38.72033.523.672.9Zelleriella sp.950.041.059.0220.095.54.590.033.366.7230.091.38.72126.122.771.2Opalina undulata10412.533.753.82680.815.43.880.037.562.52544.048.08.021310.319.370.4Opalina triangulata10311.634.054.42479.116.74.280.037.562.52646.246.27.62077.719.872.5Opalina obtrigonoidea10412.533.753.82781.514.83.780.037.562.52646.246.27.621712.018.969.1Opalina japonica10311.634.054.42580.016.04.080.037.562.52951.741.46.921511.219.169.7Opalina longa10513.433.353.32075.020.05.080.037.562.52544.048.08.021310.319.370.4PROTEROMONADIDAKarotomorpha sp. a*b5236.563.5N/AN/AN/AN/AProteromonas lacertae b5641.158.9N/AN/AN/AN/A
aThe data presented correspond to the sequence with accession number DQ431242;the Karotomorpha sp. DQ431243 sequence is partial and has not been considered for this analysis.
bData are available for only one species per genus;STRs are therefore considered in two categories* as species/genus specific* or as shared with other genera.