Additional file 1 of Evolutionary analysis and functional characterization of BZR1 gene family in celery revealed their conserved roles in brassinosteroid signaling

Additional file 1: Table S1. Gene name and ID in the seven selected species. Table S2. The detailed information of the motifs in BZR proteins. Table S3. Types of duplications of BZR1 family genes in the seven selected species. Table S4. Types of duplications of BZR1 genes in celery, coriander and carrot. Table S5. Synteny analysis of BZR1 genes and all other genes in the genomes of the three Apiaceae species. Table S6. List of orthologous BZR1 gene pairs in celery, coriander and carrot. Table S7. Ka/Ks ratios and divergence time of orthologous BZR1 gene pairs in celery, coriander and carrot. Table S8. Ka/Ks ratios and divergence time of orthologous BZR1 gene pairs in celery and Arabidopsis. Table S9. List of paralogous BZR1 gene pairs in in celery, coriander and carrot. Table S10. Non-synonymous (Ka) and synonymous substitute rate (Ks) between syntenic gene pairs in the seven selected species. Table S11. Non-synonymous (Ka) and synonymous substitute rate (Ks) between syntenic gene pairs in celery, coriander and carrot. Table S12. Ks distribution related to duplication events within each genome. Table S13. The correlation between BZR1 paralog gene pairs retain and whole genome duplication events based on Ks values. Table S14. List of primers used in this study.

附加文件1：表S1 所选7个物种的基因名称与基因ID。表S2 BZR蛋白基序的详细信息。表S3 所选7个物种中BZR1家族基因的复制类型。表S4 芹菜、芫荽与胡萝卜中BZR1基因的复制类型。表S5 3个伞形科物种基因组内BZR1基因与其余所有基因的共线性分析结果。表S6 芹菜、芫荽与胡萝卜中BZR1直系同源基因对列表。表S7 芹菜、芫荽与胡萝卜中BZR1直系同源基因对的Ka/Ks比值与分化时间。表S8 芹菜与拟南芥中BZR1直系同源基因对的Ka/Ks比值与分化时间。表S9 芹菜、芫荽与胡萝卜中BZR1旁系同源基因对列表。表S10 所选7个物种中共线性基因对之间的非同义替换率（Ka）与同义替换率（Ks）。表S11 芹菜、芫荽与胡萝卜中共线性基因对之间的非同义替换率（Ka）与同义替换率（Ks）。表S12 各基因组内与复制事件相关的Ks分布情况。表S13 基于Ks值的BZR1旁系同源基因对保留与全基因组复制事件的相关性。表S14 本研究所用引物列表。