Monodelphis domestica (Opossum Jan. 2007 ASM229v1)

High confidence set 450 tRNAs decoding standard 20 AA 449 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 11 Unexpected anticodons 2 Non-canonical anticodon loop length 1 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 24510 Secondary filter (low feature scores, possible rep. element) 589 Tertiary filter (excessive isotype copies, possible rep. element) 2 Arg TCT 5 Leu CAA 4 Ile TAT 5 Tyr GTA 13 Isotype tRNA Count by Anticodon Total Ala AGC 14 GGC CGC 5 TGC 8 27 Gly ACC GCC 23 CCC 8 TCC 10 41 Pro AGG 11 GGG CGG 3 TGG 8 22 Thr AGT 12 GGT CGT 3 TGT 7 22 Val AAC 9 GAC CAC 8 TAC 5 22 Isotype tRNA Count by Anticodon Total Ser AGA 11 GGA CGA 3 TGA 5 ACT GCT 8 27 Arg ACG 5 GCG CCG 4 TCG 5 CCT 5 TCT 6 25 Leu AAG 8 GAG CAG 11 TAG 5 CAA 4 TAA 2 30 Isotype tRNA Count by Anticodon Total Phe AAA GAA 12 12 Asn ATT GTT 13 13 Lys CTT 18 TTT 13 31 Asp ATC GTC 20 20 Glu CTC 12 TTC 14 26 His ATG GTG 9 9 Gln CTG 10 TTG 5 15 Isotype tRNA Count by Anticodon Total Ile AAT 13 GAT CAT TAT 5 18 iMet/Met CAT 12/12 24 Tyr ATA GTA 13 13 Supres TCA CTA TTA 0 Cys ACA GCA 46 46 Trp CCA 6 6 SelCys TCA 1 1