Additional file 2: of Closely related fungi employ diverse enzymatic strategies to degrade plant biomass
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Combines Additional file Tables S2–S4 (excel format). Table S2A. Numbers of putative genes per CAZy family for the 10 genomes addressed in this study. Table S2B. Numbers of putative genes per Plant Polysaccharide Degradation-related CAZy family for the 10 genomes addressed in this study. Table S3A. Orthology clusters of feruloyl esterase (SF), glycoside hydrolase (GH), carbohydrate esterase and polysaccharide lyase (PL) families. Table S3B. Orthology clusters of auxiliary activities (AA). Table S4A. Detection of proteins in cultures grown on wheat bran sorted by CAZy family. Table S4B. Detection of proteins in cultures grown on sugar beet pulp sorted by CAZy family. Table S4C. Detected proteins in cultures grown on wheat bran sorted by number of species that contain an orthologue. Table S4D. Detected proteins in cultures grown on sugar beet pulp sorted by number of species that contain an orthologue.
本数据集整合了补充文件中的表S2至表S4(格式为Excel)。表S2A:本研究涉及的10个基因组中,每个碳水化合物活性酶(Carbohydrate-Active enZymes, CAZy)家族的推定基因数量。表S2B:本研究涉及的10个基因组中,每个植物多糖降解相关碳水化合物活性酶家族的推定基因数量。表S3A:阿魏酸酯酶(SF)、糖苷水解酶(GH)、碳水化合物酯酶及多糖裂解酶(PL)家族的直系同源簇。表S3B:辅助活性(AA)家族的直系同源簇。表S4A:以碳水化合物活性酶家族分类的麦麸培养物中检测到的蛋白质。表S4B:以碳水化合物活性酶家族分类的甜菜粕培养物中检测到的蛋白质。表S4C:以携带直系同源基因的物种数量排序的麦麸培养物中检测到的蛋白质。表S4D:以携带直系同源基因的物种数量排序的甜菜粕培养物中检测到的蛋白质。
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Figshare
创建时间:
2016-12-15



