MD simulation of POPI-POPC (80:20) bilayer with CHARMM36 force field
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Dataset contains simulation files of MD simulation of POPI-POPC (80:20) bilayer in CHARMM36 force field with neutralizing NH4+ ions. System: POPI-POPC (80:20) bilayer in water Number of lipids: 200 (100/leaflet) Number of waters: 10000 Salt: Neutralizing NH4+ Number of cations: 160 Simulation time: 500 ns Sampling rate: every 10 ps Simulation engine: GROMACS 2022.4 Force field: CHARMM36 (parameters as charmm-gui input files 2.11.2023) Temperature: 310 K Equilibration: 50 ns (equilibration period in the uploaded trajectory, evaluated based on area per lipid) Pre-equilibration: 2.8 ns
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Zenodo创建时间:
2025-10-31



