Temperature and Biodiversity Regulate the Robustness of Plant-Microbe Networks in Natural Forests at Large Scale

Supporting datasets and codes for manuscript "Temperature and Biodiversity Regulate the Robustness of Plant-Microbe Networks in Natural Forests at Large Scale". -----26_local_IDEN_property_summary_all.txt # Network properties summary for 26 plant-microbe networks-----Bacteria_uparse_Classifier_of_16srrna.txt # Taxonomy file for microbial OTUs in communities-----plant_for_network_ncbi_taxnonomy.txt # Taxonomy file for plant species-----RawInputs # Raw files including plant community and microbial community for each forest site, which was used to generate plant-microbe networks in iNAP(https://inap.denglab.org.cn)--------------BDGS_Filtered_matrix_with_majority.txt # BDGS forest site as an example-----Results # Generated plant-microbe network results, including network file and node files--------------BDGS_SpiecEasi_bipartite_cytoscape.sif # Network file of plant-microbe networks for BDGS forest site--------------BDGS_SpiecEasi_bipartite_cytoscape_node_FG.txt # Node attribute file of plant-microbe networks for BDGS forest site. # Codes for conducting analysis and generating plots-----Plots_bipartite_networks.R # Codes for Figure 1 of plant-microbe networks-----Plots_correlations.R # Codes for correlation plots in Figures 2 and 3-----Plots_PLS-PM.R # Codes for PLS-PM analysis in Figure 4