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Methyl-Spec-seq data for HOXB13

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NIAID Data Ecosystem2026-05-17 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP115519
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We developed a novel in-vitro experimental method to characterize the protein-DNA interaction specificity and methylation sensitivity, we called Methyl-Spec-seq. In this data set, mouse HOXB13 (F1-F3) was used as a positive control example to show that Methyl-Spec-seq can determine the relative binding energy for variants with different methylation property, i.e., unmethylated, top hemimethylated, bottom hemimethylated, duplex methylated by either chemical synthesis or enzymatic treatment. Overall design: Except different methylation types of DNA, the overall design is the same as conventional Spec-seq, which we have published work before.
创建时间:
2017-11-23
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