Additional file 12 of The genome and transcriptome of the snail Biomphalaria sudanica s.l.: immune gene diversification and highly polymorphic genomic regions in an important African vector of Schistosoma mansoni
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Additional file 12: Supplementary Table 11. Enriched gene ontology (GO) terms found in the protein families that significantly expanded or contracted in the CAFE 5 [69] analysis. At each node it is specified the IDs and total count of the Phylogenetic Hierarchical Orthogroups (HOG) identified to be either expanded or contracted, followed by the enrichment results produced by v2.48.0 [73]: the GO terms enriched, the total number of annotated HOGs with each GO terms, how many GO terms were observed, and the total number of GO terms expected given the list size and the p-value.
附加文件12:补充表11。本表格收录了在CAFE 5[69]分析中发生显著扩张或收缩的蛋白质家族所富集的基因本体(Gene Ontology,GO)术语。在每个系统发育节点处,均标注了被鉴定为发生扩张或收缩的系统发育层级直系同源组(Phylogenetic Hierarchical Orthogroups, HOG)的ID及其总数量;随后附上由v2.48.0[73]生成的富集分析结果:包括富集的GO术语、每个GO术语所注释的HOG总数量、实际观测到的GO术语数量,以及基于分析列表规模与p值所预期的GO术语总数量。
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2024-09-11



