Reciprocal Best Structure Hits (RBSH)
收藏DataCite Commons2025-05-30 更新2024-08-25 收录
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https://www.repository.cam.ac.uk/handle/1810/341254
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资源简介：
In this work, we are using AlphaFold structure models to find the closest homologues proteins between Homo sapiens and D. melanogaster, C. elegans, S. cerevisiae and S. pombe as well as between S. cerevisiae and S. pombe. We are using the structure aligner Foldseek to run all against all and search for the best scoring hit in both directions to detect the Reciprocal Best Structure Hits (RBSH). We compare the results to protein pairs detected by their sequence similarity as Reciprocal Best Hits (RBH) and verify the results using the PANTHER family classification files. $$ \ $$ Note: This dataset is an updated version of the dataset at https://doi.org/10.17863/CAM.85487.
提供机构：
Apollo - University of Cambridge Repository
创建时间：
2022-08-25
