Additional file 9 of Large-scale gene network analysis reveals the significance of extracellular matrix pathway and homeobox genes in acute myeloid leukemia: an introduction to the Pigengene package and its applications

Supplementary Data 1. DNA-methylation. The DNA methylation of MMP9, MMP8, and MMP25 genes in TCGA dataset are available as part of the online supplementary materials. The two sheets include the patient barcodes for 194 AML and 368 control samples. The β values were reported at cg04656101 (equivalent to chr20:44,645,014 in hg19), cg01092036 (chr11:102,595), and cg02680314 (chr16:3,097,388), respectively (Additional file 1: Figure S9b). (XLS 102 kb)