EarthCube2020: Reproducible and Replicable Scientific Use Cases with CyberGIS-Jupyter for water and Sciunit tool using SUMMA and pySUMMA
收藏www.hydroshare.org2020-04-13 更新2025-03-26 收录
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https://www.hydroshare.org/resource/87a7feaf1178444b83365d7133198f5e
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资源简介:
These notebooks are created to evaluate the reproducibility and replicability using Sciunit in different computational environment.
You can open these notebooks using CyberGIS-Jupyter for water from `Open with button`.
Notebook1 and notebook2 were created in local computer to test computational environment and create Sciunit containers to encapsulate SUMMA simulation workflow.
- Notebook1: N_1_Reproducibility_Evaluation_of_the_SUMMA_Model_in_the_Model_Agnostic_Framework.ipynb
- Notebook2: N_2_Creating_and_Executing_the_Sciunit_Container_to_Encapsulating_and_Evaluating_the_immutable_computational_environment.ipynb
So you can start with notebook3.
- Notebook3: N_3_Reproducibility_and_Replicability_Evaluation_using_the_Sciunit_Container_in_CyberGIS_for_water.ipynb
From this process, you can evaluate the reproducibility and replicability of SUMMA simulation with repeating of Sciunit container and changing the SUMMA configuration.
- Reproduced SUMMA application: Three different stomatal Resistance Parameterizations (BallBerry, Jarvis, and Simple Stomatal Method)
- Replicated SUMMA application: Changing the function for the soil moisture control on stomatal resistance from NoahType to CLM_Type
本系列笔记旨在通过Sciunit评估不同计算环境下的可重现性和可复制性。您可利用CyberGIS-Jupyter打开这些笔记进行水资源分析,通过点击“打开”按钮即可。笔记1和笔记2是在本地计算机上创建的,以测试计算环境并构建Sciunit容器,以封装SUMMA模拟工作流程。
- 笔记1:N_1_Reproducibility_Evaluation_of_the_SUMMA_Model_in_the_Model_Agnostic_Framework.ipynb
- 笔记2:N_2_Creating_and_Executing_the_Sciunit_Container_to_Encapsulating_and_Evaluating_the_immutable_computational_environment.ipynb
您可从笔记3开始操作。
- 笔记3:N_3_Reproducibility_and_Replicability_Evaluation_using_the_Sciunit_Container_in_CyberGIS_for_water.ipynb
通过此过程,您可通过重复Sciunit容器并改变SUMMA配置来评估SUMMA模拟的可重现性和可复制性。
- 可重现的SUMMA应用:三种不同的气孔阻力参数化(BallBerry、Jarvis和简单气孔方法)
- 可复制的SUMMA应用:将气孔阻力土壤湿度控制函数从NoahType更改为CLM_Type
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