five

The genome assembly and gene annotation of oat.

收藏
DataCite Commons2021-06-01 更新2024-07-28 收录
下载链接:
https://figshare.com/articles/dataset/The_genome_assembly_and_gene_annotation_of_oat_/13546427/1
下载链接
链接失效反馈
官方服务:
资源简介:
The data include a summary of the genome assembly and annotation of oat. Chromosome-level genome assembly and scaffold-level genome assembly are both can be found in this dataset. Genome annotation files are provided in .fa file, .gff3 file and .cds file. The functional annotation of genes in oat is using by interpro. Average read counts of genes in six difference tissues which include roottip, root, leaf, shoot, panicle adnd spikelet are listed in the dataset. By using genome assembly, the accurate prediction of transcription factor and annotation of FL_LTR is processed. Please see the README.txt file for the detailed information. <br>

本数据集包含燕麦基因组组装与注释的相关汇总信息。数据集同时提供染色体级基因组组装结果与支架级基因组组装结果。基因组注释文件以FASTA格式(.fa)、GFF3格式(.gff3)以及编码序列(CDS)文件(.cds)格式提供。燕麦基因的功能注释采用InterPro数据库(interpro)完成。数据集还列出了6种不同组织中基因的平均测序读段计数,涵盖根尖、根、叶片、幼芽、穗以及小穗。基于本数据集的基因组组装结果,完成了转录因子(Transcription Factor)的精准预测以及FL_LTR的注释分析。详细信息请参阅README.txt文件。
提供机构:
figshare
创建时间:
2021-06-01
二维码
社区交流群
二维码
科研交流群
商业服务