Pakistani historical wheat panel 37K SNP data

A collection of 196 historical wheat cultivars of Pakistan released between 1911 to 2022 were subjected to DNA fingerprinting using 16K genotyping-by-targeted sequencing (GBTS) platform. This platform is based on NGS and the 16K probes were resequenced. The resequencing data was aligned to Chinese Spring RefSeq version 1.1 and SNPcalling was performed. This resulted in 37K mSNP (multiple SNPs) DNA fingerprinting data. This is thus far the most comprehensive DNA fingerprinting data of all released cultivars of wheat so far. This data is publically available and can be used in research and publications subject to the acknowledgement.Â

本数据集包含196份1911年至2022年间巴基斯坦审定通过并发布的历史小麦品种，采用16K靶向测序基因分型（Genotyping-by-Targeted Sequencing, GBTS）平台开展DNA指纹图谱分析。该平台基于下一代测序（Next-Generation Sequencing, NGS）技术，且对16K探针完成了重测序。将重测序数据比对至中国春参考基因组序列（Chinese Spring RefSeq）v1.1版本，并开展了单核苷酸多态性（Single Nucleotide Polymorphism, SNP）Calling分析，最终得到37K个多SNP（multiple SNPs）位点的DNA指纹图谱数据集。这是目前为止覆盖所有已审定小麦品种的最为全面的DNA指纹图谱数据集。本数据集公开可获取，可用于科研与学术发表，但需在相关研究或出版物中注明本数据集的来源。