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Angus Sequence Data: Animal 29443

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agdatacommons.nal.usda.gov2024-10-21 更新2025-03-22 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Angus_Sequence_Data_Animal_29443/24665955/1
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Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.The National Animal Germplasm Program has germplasm for this animal, with the repository number 29443.There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.Resources in this dataset:Resource Title: Animal 29443 Sequence Data - SCINet.File Name: Web Page, url: https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32129/tar file containing 14 files. The files are: RAPiD-Genomics_F112_CSU_136201_P001_WB09_i5-515_i7-117_S21_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WB09_i5-515_i7-117_S21_L003_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WB09-i5-515-i7-117_S157_L002_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WB09-i5-515-i7-117_S157_L002_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WB09-i5-515-i7-117_S21_L001_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WB09-i5-515-i7-117_S21_L001_R2_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WB09-i5-515-i7-117_S21_L003_R1_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WB09-i5-515-i7-117_S21_L003_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WB09_i5-515_i7-117_S21_L001_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WB09_i5-515_i7-117_S21_L001_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WB09_i5-515_i7-117_S21_L002_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WB09_i5-515_i7-117_S21_L002_R2_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WB09_i5-515_i7-117_S376_L002_R1_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WB09_i5-515_i7-117_S376_L002_R2_001.fastq.gzSCINet users: The .tar file can be accessed/retrieved with valid SCINet account at this location: /LTS/ADCdatastorage/NAL/published/node32129/See the SCINet File Transfer guide for more information on moving large files: https://scinet.usda.gov/guides/data/datatransferGlobus users: The files can also be accessed through Globus by following this data link. The user will need to log in to Globus in order to retrieve this data. User accounts are free of charge with several options for signing on. Instructions for creating an account are on the login page.

全基因组序列数据集,针对牛科动物牛属的安格斯牛肉品种。数据以“fastq”格式存储。国家动物种质资源项目持有该动物的种质资源,库编号为29443。每个文件包含两个版本,由于进行了对端测序,因此每个文件有两个读取序列(一个正向读取和一个反向读取),总计420个读取序列。本数据集的示意图收录于收集数据集中。在示意图中,两个读取序列分别对应读取1和读取3。本数据集中的资源包括: 资源标题:动物29443序列数据 - SCINet。 文件名:网页,链接:https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node32129/tar文件,包含14个文件。文件列表如下: RAPiD-Genomics_F112_CSU_136201_P001_WB09_i5-515_i7-117_S21_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WB09_i5-515_i7-117_S21_L003_R2_001.fastq.gz ... RAPiD-Genomics_F116_CSU_136201_P001_WB09_i5-515_i7-117_S376_L002_R2_001.fastq.gz SCINet用户:可通过有效的SCINet账户访问/检索.tar文件,位置为/LTS/ADCdatastorage/NAL/published/node32129/。更多关于移动大型文件的信息,请参阅SCINet文件传输指南:https://scinet.usda.gov/guides/data/datatransfer。 Globus用户:用户也可以通过Globus访问这些文件,需按照以下数据链接进行操作。用户需要登录Globus以检索这些数据。用户账户免费,提供多种登录选项。创建账户的说明位于登录页面。
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