遇见数据集

Gliding motility assay using 16551mM D2O in solution. Replicate 1/3. ROI 4/15.

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DataCite Commons2020-09-05 更新2024-07-25 收录
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• This is a gliding motility assay using kinesin-1 and rhodamine labeled microtubules. • The buffer used was PEM (also known as BRB80) with the inclusion of 16551mM D2O. • Images were taken with an Andor Luca EMCCD camera on an Olympus IX-71 microscope using a 60x 1.42NA PlanApo objective. • This fileset is replicate 1/3 and ROI 4/15. • Images were taken to investigate speed variations of microtubules due to the inclusion of D2O in the motility assay. • The temperature of the slide was held constant at 32°C by an objective heater. Early ROIs, i.e. 1-5, have slower giding speeds due to the increasing temperature of the slide which, was prepared at room temperature before observation. After ROI 5 the gliding speed stabilizes. • Pixels lengths were measured to be 166nm/pixel using a stage micrometer. • After the files have downloaded, a simple command line entry will convert the images to a movie. Mencoder must be installed. ls > list.txt | mencoder mf://@list.txt -mf w=496:h=658:fps=30:type=png -ovc lavc -lavcopts vcodec=mpeg4:mbd=2:trell -o output.avi • Upload of these files were made possible through the figshare API.

• 本实验为基于驱动蛋白-1(kinesin-1)与罗丹明标记微管的滑行运动测定实验。 • 实验所用缓冲液为PEM(亦称BRB80缓冲液),其中添加了16551mM重水(D₂O)。 • 成像环节采用奥林巴斯IX-71型显微镜,搭配Andor Luca EMCCD相机与60× 1.42NA PlanApo物镜完成图像采集。 • 本次文件集对应3组重复实验中的第1组,以及15个感兴趣区域(Region of Interest,ROI)中的第4个。 • 本实验旨在探究滑行运动测定体系中添加重水后,微管滑行速度的变化情况。 • 实验通过物镜加热器将载玻片温度恒定维持在32℃。早期感兴趣区域(即第1~5组)的微管滑行速度较慢,这是由于载玻片于观测前在室温下制备,随着拍摄进程推进温度逐渐升高;待第5组感兴趣区域拍摄完成后,微管滑行速度趋于稳定。 • 通过载物台测微尺(stage micrometer)标定,像素尺寸为166nm/像素。 • 文件下载完成后,可通过简易命令行指令将图像批量转换为视频。需预先安装Mencoder软件,具体指令为:ls > list.txt | mencoder mf://@list.txt -mf w=496:h=658:fps=30:type=png -ovc lavc -lavcopts vcodec=mpeg4:mbd=2:trell -o output.avi • 本次文件上传借助figshare API接口完成。

提供机构:
figshare
创建时间:
2016-01-11
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