mRNA and DNAm references for colon
收藏DataCite Commons2022-02-01 更新2024-08-18 收录
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https://figshare.com/articles/dataset/mRNA_and_DNAm_references_for_colon/14399465/1
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资源简介:
The data contains a 1124-marker expression reference and a 127-marker DNAm reference for Colon, which can be used to estimate cell type fractions of enteroendocrine cells, enterocytes, goblet cells, immnue cells, paneth-like cells and progenitor-like cells in Colon tissue with EpiSCORE framework.<br>Colon_Expref.csvA scRNAseq expression reference for Colon. Each row is a marker gene (in gene symbol) and each column is a cell type. For each marker gene, the value of the reference matrix is the median expression level for each type of cells in scRNAseq data.<br>Colon_Mref.csvA DNAm reference for Colon. Each row is a marker gene (in entrezID) and each column is a cell type. The last column is the weight for each marker. The value of the matrix is the imputed DNAm level from expression reference.
提供机构:
figshare
创建时间:
2021-04-13



