"CausalXtract: a flexible pipeline to extract causal effects from live-cell time-lapse imaging data" datasets

Datasets from the article: <strong>CausalXtract: a flexible pipeline to extract causal effects from live-cell time-lapse imaging data </strong> by Franck Simon, Maria Colomba Comes, Tiziana Tocci, Louise Dupuis, Vincent Cabeli, Nikita Lagrange, Arianna Mencattini, Maria Carla Parrini, Eugenio Martinelli, Hervé Isambert. The <strong>original videos</strong> are uploaded as: "20161230.zip", "20170105.rar", "Video_2017_0517.zip". <strong>Details </strong>for each <strong>experiment </strong>can be found in: "Experiments' details.zip". The <strong>ROIs </strong>(ROI: Region of Interest) are uploaded as .tif files in: "EXTRACTED ROIs.zip". The <strong>MATLAB data</strong> is uploaded in "MATLAB_DATA.rar" and includes: the cancer cells' trajectories (subfolder: "TUMOR TRAJECTORIES"), the immune cells' trajectories (subfolder: "IMMUNE TRAJECTORIES"), the ROIs videos as .mat files for the detection of cells (subfolder: "ROI MAT"), the ROIs further cropped for the extraction of shape descriptors (folder: "ROI_TU MAT"). The ROIs videos .mat files included in the last two subfolders are stopped after their apoptosis has been detected.