Additional file 7: of Post-translational buffering leads to convergent protein expression levels between primates

Transformed ribosome profiling, RNA-seq, and quantitative mass spectrometry data for genes that are quantifiable in all three species across all three data types. A total of six R objects are included in this .RData file. Ribo.expressed.data: TMM normalized log2RPKM values of ribosome profiling data, ribo.expressed.weights: corresponding voom weights for ribosome profiling data, ribo.expressed.ref: TMM normalized log2RPKM values of ribosome profiling data for the reference cell line (GM19238), RNA.expressed.data: TMM normalized log2RPKM values of RNA-seq data, RNA.expressed.weights: corresponding voom weights for RNA-seq data, RNA.expressed.ref: TMM normalized log2RPKM values of RNA-seq data for the reference cell line (GM19238), protein.expressed.data: trimmed mean centered SILAC ratios for quantitative mass spectrometry data. (RDATAÂ 1942Â kb)本数据集涵盖可在全部三个物种中、且可通过全部三类数据类型实现定量的基因的经转化核糖体谱（ribosome profiling）、RNA测序（RNA-seq）及定量质谱数据。本.RData文件中共包含六个R对象：Ribo.expressed.data为经加权修剪均值（trimmed mean of M-values, TMM）归一化的核糖体谱数据log₂RPKM值；ribo.expressed.weights为对应核糖体谱数据的voom权重；ribo.expressed.ref为参考细胞系（GM19238）的核糖体谱数据经TMM归一化后的log₂RPKM值；RNA.expressed.data为经TMM归一化的RNA-seq数据log₂RPKM值；RNA.expressed.weights为对应RNA-seq数据的voom权重；RNA.expressed.ref为参考细胞系（GM19238）的RNA-seq数据经TMM归一化后的log₂RPKM值；protein.expressed.data为定量质谱数据的经修剪均值中心化的SILAC（stable isotope labeling with amino acids in cell culture）比值。该.RData文件大小为1942 KB。