Detect R-loop signal by DRIP-seq in PA1 cell line
收藏NIAID Data Ecosystem2026-05-01 收录
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DRIP-seq of PA1 cells DRIP-seq of PA1 cells
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创建时间：
2023-12-25
相关数据集
DNA-RNA three-stranded hybrids: from the telomere to the genome (human dataset)
The origin and possible functions of local three-stranded DNA-RNA hybrid regions in the mammalian genome is still a matter of discussion. R-loops have been so far essentially detected by immunodetecti
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S1 File -
Fig A, Representative experiment of DRIVE Assay in RNaseH1 pretreated (black bars) and not pretreated (white bars) samples. (Panel A) Three positive (RPL13A, BTBD19, MYADM) and two negative (SNRPN, a-
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Training matrices
Training matrices containing RPM of 12 high throughput sequencing datasets scored within experimental R-loop peaks and random regions in HEK293, K562 and HeLa cell lines.
Figshare2025-01-22 更新10
DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7. DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7
DREAM-seq, an endonucleases-assisted mapping of R-loops: MCF-7 Overall design: Two MCF-7 cell samples, including Mock and Rnase H treated samples
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Genome-wide mapping of G-quadruplex structures with CUT&Tag. Genome-wide mapping of G-quadruplex structures with CUT&Tag
Single-stranded genomic DNA can fold into G-quadruplex (G4) structures or form DNA:RNA hybrids (R loops). Recent evidence suggests that such non-canonical DNA structures affect gene expression, DNA me
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