MOESM1 of Transcriptome-wide association study identifies putative elicitors/suppressor of Puccinia graminis f. sp. tritici that modulate barley rpg4-mediated stem rust resistance

Additional file 1: Contains supplementary tables Table S1-S13. Microsoft Excel Workbook containing 13 tables. Table S1. Group of Pgt isolates based on their virulence on barley lines containing stem rust resistance gene rpg4/5 and/or Rpg1. Table S2. Infection type of group1 Pgt isolates on barley differential lines. Table S3. Infection type of group2 Pgt isolates on barley differential lines. Table S4. Infection type of group3 Pgt isolates on barley differential lines. Table S5. Read and mapping statistics of RAD-GBS data of Pgt Samples. Table S6. RNAseq read mapping statistics for the Pgt inoculated Harrington samples. Table S7. RNAseq read mapping statistics for the non-inoculated Harrington samples. Table S8. Differentially expressed gene in between virulent rpg4/5 and avirulent rpg4/5 inoculated sampled and its comparison with the non-inoculated controls. Table S9. Gene enrichment analysis of differentially expressed gene in virulent vs avirulent rpg4/5 inoculated Harrington in R bioconductor package TopGO, Table S10. List of gene that are differentially regulated in Rpg1 virulent isolates compared to Rpg1 avirulent isolates. Table S11. List of gene that are differentially regulated in rpg4/5 virulent isolates compared to rpg4/5 avirulent isolates. Table S12. Identification of Pgt Candidate Secreted Effector Protein (CSEP) and their classification based on level of expression. Table S13. Variants associated with Pgt virulence on rpg4/5.