Additional file 2 of The genome of a wild Medicago species provides insights into the tolerant mechanisms of legume forage to environmental stress

Additional file 2: Table S1. Estimation of genome size of M. ruthenica using 17-mer analysis. Table S2. Sequencing data generated from different platforms/strategies. Table S3 The assemblage summary of the M. ruthenica genome Version 0.8 before chromosome anchoring by Hi-C. Table S4. The assemblage summary of the M. ruthenica genome Version 1.0. Table S5. Genome estimation using RNA sequencing data. Table S6. Assessment of the transcript coverage with the transcritome assembly. Table S7. The prediction of repeat elements in the M. ruthenica genome. Table S8. Categories of transposable elements predicted in the M. ruthenica genome. Table S9. General statistics of predicted protein-coding genes in M. ruthenica. Table S10. General statistics of mapping rate to functional database of protein-coding genes. Table S11. General statistics of protein-coding genes of homolog species. Table S12. GO enrichment of unique genes in M. ruthenica. Table S13. General statistics of non-coding RNA of the genome. Table S14. Statistics of synteny blocks within M. ruthenica and M. truncatula, M. ruthenica and T. pratense, M. ruthenica and C. arietinum, and M. ruthenica itself. Table S15. The corresponding relationship of synteny blocks in M. ruthenica with M. truncatula. Table S16. Statistics of TFs in M. ruthenica, M. truncatula and M. sativa. Table S17. Information of FHY3/FAR1 genes in M. ruthenica. Table S18. Information of FHY3/FAR1 genes in M. truncatula. Table S19. The GO enrichments of expanded families. Table S20. The GO enrichments of contracted families. Table S21. The GO enrichments of lost genes in the genome of M. truncatula during domestication. Table S22. The GO enrichments of lost genes in the genome of M. sativa during domestication. Table S23. Statistics of transcriptome libraries. Table S24. TFs responsive to drought in M. ruthenica. Table S25. TFs responsive to drought in M. truncatula. Table S26. Resequencing data of 19 accessions. Table S27. Statistics and annotation of SNPs. Table S28. Candidate genes associated with drought tolerance analyzed by selective sweep. Table S29. The GO enrichments of candidate genes associated with drought tolerance analyzed by selective sweep. Table S30. The GO enrichments of drought-responsive genes from Zhenglanqi accession. Table S31. The GO enrichments of drought-responsive genes from Xinghe accession. Table S32. Classification of potential MYB target genes which were responsive to drought stress.