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Additional file 1: of Evaluation of methods for differential expression analysis on multi-group RNA-seq count data

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Figshare2016-12-16 更新2026-04-08 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Evaluation_of_methods_for_differential_expression_analysis_on_multi-group_RNA-seq_count_data/4474685/1
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R code for obtaining simulation results with replicates (Table 1 ). After execution of this R-code with default parameter settings, the average AUC values of 100 trials under the following conditions shown in Table 1 can be obtained: PDEG = 5 %, (0.5, 0.4, 0.1) for (PG1, PG2, PG3), and Nrep = 3. The results in Additional file 2 can also be obtained by changing the parameter Nrep to be 6 or 9. (R 12 kb)
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Jianqiang Sun
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2016-12-16
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