Code and data to reproduce "Landscape structure and species life history effects on abundance-occupancy relationships"

<pre>## Landscape structure and species life history effects on abundance-occupancy relationships<br><br>### Citation<br><br>Code and data to reproduce the analyses from<br><br>&gt; Dallas, TA, LA Holian, and C Ten Caten 2024. Landscape structure and species life history affect abundance-occupancy relationships. <br><br><br><br><br><br>## Compiling the project<br><br>To compile the R markdown, the following terminal command can be issued from the directory where the files are all located.<br><br>Note: this is not really recommended to compile it this way, as it will have to run for quite a long time. <br><br>```<br>Rscript -e 'install.packages(c("plyr", "dplyr", "igraph", "viridis"))'<br><br>Rscript -e 'rmarkdown::render("DallasNeonRicker.Rmd", output_format="pdf_document")'<br><br>```<br><br><br><br>```{r}<br><br>sessionInfo()<br><br>```<br><br>R version 4.1.0 (2021-05-18)<br>Platform: x86_64-pc-linux-gnu (64-bit)<br>Running under: Ubuntu 20.04.2 LTS<br><br>Matrix products: default<br>BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3<br>LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3<br><br>locale:<br> [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C <br> [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 <br> [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 <br> [7] LC_PAPER=en_US.UTF-8 LC_NAME=C <br> [9] LC_ADDRESS=C LC_TELEPHONE=C <br>[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C <br><br>attached base packages:<br>[1] stats graphics grDevices utils datasets methods base <br><br>other attached packages:<br>[1] dplyr_1.0.7 plyr_1.8.6 igraph_1.2.8<br><br>loaded via a namespace (and not attached):<br> [1] Rcpp_1.0.7 fansi_0.5.0 crayon_1.4.1 utf8_1.2.2 <br> [5] R6_2.5.1 lifecycle_1.0.0 magrittr_2.0.1 pillar_1.6.2 <br> [9] rlang_0.4.11 vctrs_0.3.8 generics_0.1.0 ellipsis_0.3.2 <br>[13] tools_4.1.0 glue_1.4.2 purrr_0.3.4 compiler_4.1.0 <br>[17] pkgconfig_2.0.3 tidyselect_1.1.1 tibble_3.1.4 <br><br><br><br></pre>