SARS-CoV-2 Spike Mutation Co-occurrence Network - Segment 1: Genomic Surveillance of Co-evolving Mutations in a Global Dataset

================================================================================ FINAL SUMMARY: AGGREGATE ACROSS ALL 1 to 50 FILES ================================================================================ Total number of files processed: 50 Total number of mutation pair records analyzed: 50,000 Sum of all 'total_count' values (co-occurrence observations): 1,222,231,457 Sum of all 'num_additional' values (beyond top 100 per pair): 1,217,231,457 Total accession count (from top100 lists, with duplicates): 5,000,000 Total unique accessions (from top100 lists): 31,971 Total unique countries represented: 5 Top countries detected: Japan, Mexico, South Africa, UK, USA Note: - 'total_count' = number of sequences where a mutation pair co-occurs - 'num_additional' = additional sequences beyond the reported top 100 accessions - 'Total accession count' = sum of all accession IDs listed (with duplicates) - 'Total unique accessions' = number of distinct accession IDs across all top100 lists - High duplication indicates recurrent co-occurrence signals in dominant lineages This dataset represents a large-scale co-occurrence analysis of Spike gene mutations in SARS-CoV-2, capturing strong epistatic signals and geographic spread associated with variant emergence and immune escape. Note: This is Segment 01 of an ongoing global genomic surveillance series (N=8 approx. planned segments). Data from all segments will be integrated in the final meta-analysis. End of report. © 2025 Tahir HB (GVAtlas). All Rights Reserved. This dataset and all associated analyses are the intellectual property of TahirHB / GVAtlas.Org No part of this work may be reproduced, distributed, or transmitted in any form (including but not limited to electronic, mechanical, photocopying, or recording) without prior written permission from the author. For licensing or collaboration inquiries, contact: [e-mail]