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Proteins identified from the black smoker chimney Inferno hydrothermal vent plume meta-proteome - replicate Av1 - on the Axial seamount off the coast of Washington in 2011.

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DataONE2017-11-12 更新2024-06-26 收录
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<p>Proteins identified in the Inferno hydrothermal vent plume meta-proteome (replicate Av1).&nbsp; Only proteins identified by peptides with a protein probability &gt;0.9 are listed.&nbsp;</p> <p>These data are reported as Supplementary Table 3 and discussed in <a href=\"http://dmoserv3.bco-dmo.org/data_docs/SulfurOxidizers/Mattes_2013_PlumeProt.pdf\" target=\"_blank\">Mattes et al., 2013</a>. (doi:10.1038/ismej.2013.113)</p> <p>The FASTA information in the data was expanded to include the metadata when those FASTA headers were linked to GenBank.&nbsp;</p> <p><em>Proteins that were identified in biological replicate Av2 that were not identified in biological replicate Av1. (GSO: Gamma Sulfur Oxidizer)</em></p> <p><img alt=\"\" src=\"https://datadocs.bco-dmo.org/d3/data_docs/SulfurOxidizers/Table5.png\" style=\"float:left; height:174px; width:637px\" /><br /> &nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>\"Although fewer proteins were identified in Av2, nearly all (94%) of the proteins identified in Av2 were also identified in Av1.&nbsp; Differences in the total number of proteins identified in replicate samples may result from differences in the amount of biomass obtained during sample processing.\"</p> <p><strong>DMO notes:</strong><br /> Put multiple FASTA entries on separate lines<br /> Split out one number in FASTA header for linking<br /> Left it sorted by Total Independent Spectra column<br /> Added linkage column<br /> Removed commas in 'consensus annotation' column (signals database to put in new column)<br /> Reordered columns to put KEGG last -- much longer than any other column</p>
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2021-12-05
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