Supplemental Material for Gallagher et al., 2020

Fig S1, RNA-seq library PCA by timepoint; Fig. S2, REVIGO plots summarizing homoeologous gene coexpression network module GO term enrichment; Fig. S3, patterns of module eigengene expression for each homoeologous gene coexpression network module; Fig. S4, gene membership correspondence between the wild and domesticated gene coexpression networks; Table S1, RNA-seq library read mapping and counts summary; Table S2, GO enrichment results for differentially expressed genes; Table S3, basic statistics for the joint and homoeologous gene coexpression networks; Table S4, GO enrichment results for the homoeologous gene coexpression network modules; Table S5, basic statistics for the wild and domesticated gene coexpression networks; Table S6, GO enrichment results for the differentially coexpressed genes; Table S7, genes showing both differential expression and differential coexpression; Table S8, genes showing both differential expression and differential coexpression related to cell wall biosynthesis and the cytoskeleton.