GSEA-based Pathway Analysis Results of Matched Primary and Locally Recurrent Breast Tumors

GSEA analysis of recurrent and primary tumor sub-divided by estrogen receptor status. Output is provided for RNA and protein data for both the HALLMARKS and KEGG databases.
Test was run on ER positive and negative sample subgroups, with recurrent samples over primary tumors.

This dataset was used for Figure 5 in the following manuscript:
 "Proteogenomics decodes the evolution of human ipsilateral breast cancer". De Marchi T, Pyl PT, Sjöström M, Reinsbach SE, DiLorenzo S, Nystedt B, Tran L, Pekar G, Wärnberg F, Fredriksson I, Malmström P, Fernö M, Malmström L, Malmström J, Nimèus E. accepted for publication

对由雌激素受体状态划分的复发性和原发性肿瘤进行GSEA分析。数据集提供了HALLMARKS和KEGG数据库中RNA和蛋白质数据的输出。测试在雌激素受体阳性和阴性样本亚组中进行，并对比了复发样本与原发性肿瘤样本。本数据集被用于以下文献的图5部分：《蛋白质组学解码人类同侧乳腺癌的演变》De Marchi T, Pyl PT, Sjöström M, Reinsbach SE, DiLorenzo S, Nystedt B, Tran L, Pekar G, Wärnberg F, Fredriksson I, Malmström P, Fernö M, Malmström L, Malmström J, Nimèus E. 已接受发表。