Python script for pattern search in Sox2 binding sequences
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https://figshare.com/articles/dataset/Python_script_for_pattern_search_in_Sox2_binding_sequences/3806355
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资源简介：
Cock PA, Antao T, Chang JT, Bradman BA, Cox CJ, Dalke A, Friedberg I, Hamelryck T, Kauff F, Wilczynski B and de Hoon MJL (2009) Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics, 25, 1422-1423
Chapman BA and Chang JT (2000). Biopython: Python tools for computational biology. ACM SIGBIO Newsletter, 20, 15-19
Shirley MD, Ma Z, Pedersen B, Wheelan S. Efficient "pythonic" access to FASTA files using pyfaidx. PeerJ PrePrints 3:e1196. 2015.
Dhanusha Yesudhas, Muhammad Ayaz Anwar, Suresh Panneerselvam, Kim Han Kyul & Sangdun Choi*An approach to evaluate binding affinities of Sox2 with distinct DNA binding sequences by Umbrella Sampling (Manuscript under preparation)* http://sangdunchoi.openwetware.org/
Boyer, L. A. et al. Core transcriptional regulatory circuitry in human embryonic stem cells. Cell 122, 947-956, doi:10.1016/j.cell.2005.08.020 (2005).
创建时间：
2016-09-05
