Additional file 7: Table S5. of Immune and biochemical responses in skin differ between bovine hosts genetically susceptible and resistant to the cattle tick Rhipicephalus microplus

Differentially expressed genes (DEGs) between skins of different breeds (inter-breed comparisons). The types of skin (Bsl, baseline; Str, stressed; Lar, larvae-infested; Nym, nymph-infested) are given for each comparison against the susceptible breed, as named across the sheets. DEGs were calculated using limma R package from Bioconductor software. The up- (positive values) or downregulation (negative values) shown are of expression of genes from skin of the resistant breed compared to susceptible and are displayed in “logFC” column. (XLSX 232 kb)