For HrI2, (A) refers to genes with a private A/J SNP, (C) refers to genes with a private 129S1/SvImJ SNP. Unmarked genes had both A/J and 129S1/SvImJ SNPs.
1Rare variants were counted in “all” candidate regions or only in “conserved sites” within candidate regions.2The rare variants are defined by minor allele frequency below 1% in both case and control
