Bombus huntii genome assembly scripts
收藏DataCite Commons2024-05-15 更新2024-07-03 收录
下载链接：
https://agdatacommons.nal.usda.gov/articles/workflow/Bombus_huntii_genome_assembly_scripts/25762431/1
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资源简介：
The data in this repository is to provide the scripts used in the assembly of the <i>Bombus huntii </i>genome. It can be used to replicate the steps necessary to assemble the genome described in National Center for Biotechnology Information (NCBI) BioProject: PRJNA858880. This genome assembly workflow was performed on the United States Department of Agriculture (USDA) - SCINet/Mississippi State University High Performance Computing Cluster (HPC) Atlas and installed via Conda.Dependenciesbamtools v2.5.1pigz v2.6any2fasta v0.4.2Singularity v3.8.3NCBI FCS adaptorHiFiAdapterFilt v3.0.1HiFiASM v0.19.3-r572BBmap v38.90KMC v3.2.1GenomeScope2 v2.0BLAST+ v2.0diamond v2.0.9minimap2 v2.22-r1101blobtoolkit2 v4.1.5blobblurb v1.2seqer v1.2yahs v1.1<br>
提供机构：
Ag Data Commons
创建时间：
2024-05-14
