Drosophila ficusphila genome annotations v0.5.3 for genome assembly Dfic02082011

This research on Drosophila ficusphila genomics is part of the Drosophila modENCODE project.The Baylor College of Medicine is studying the comparative genomics of eight species of Drosophila, including biarmipes, bipectinata, elegans, eugracillis, ficusphila, kikkawai, rhopaloa, and takahashii. RNA-Seq data were used with additional protein homology data for a MAKER automated annotation of the Drosophila ficusphila genome assembly Dfic02082011. This gene set is an unstable pre-release (v0.5.3), and is provided to facilitate manual curation and analyses. Gene identifiers from this gene set will not be maintained.

Resources in this dataset:
Resource Title: Drosophila ficusphila genome annotations v0.5.3 for genome assembly Dfic02082011.
File Name: DFIC_BCM_version_0.5.3-Primary_Gene_Set.tar.gz
Resource Description: The attached tar.gz archive (DFIC_BCM_version_0.5.3-Primary_Gene_Set.tar.gz) contains the following files:

DFIC.Analysis.gff3. This gff3 file contains evidence underlying the final gene predictions.

DFIC.CDS.fna. CDS sequences of Drosophila ficusphila genome annotations v0.5.3.

DFIC.faa. Amino acid sequences of Drosophila ficusphila genome annotations v0.5.3.

DFIC.fna. cDNA sequences of Drosophila ficusphila genome annotations v0.5.3.

DFIC.Models.gff3. Gff3 of all gene predictions of Drosophila ficusphila genome annotations v0.5.3.