Additional file 2 of A key gene, violaxanthin de-epoxidase-like 1, enhances fucoxanthin accumulation in Phaeodactylum tricornutum

Additional file 2: Table S1. Average depth of base calls at each nucleotide position of the 5’ end (-203 ~ 100 bp) of P. tricornutum VDL1 gene based on the published RNA sequencing data (Mccarthy et al., 2017). Table S2. RPKM values of VDL1 alleles at different culture conditions based on the reanalysis of RNA sequencing data from Mccarthy et al. (2017). Table S3. Identity analysis of VDL1 proteins from different species. Table S4. Signal peptide prediction results. Table S5. Percentage of pigment contents (data from Fig. 6b) in wild-types Pt1 and Pt6, and in eight VDL1 overexpression (OE) strains. Table S6. Information on VDL1 polymorphic sites, and software running parameters and version. Table S7. Promoter elements of VDL1 gene. Table S8. Primers used in the present study.