Additional file 13: Table 12. Permanova based on Bray-Curtis dissimilarities testing for differences in beta diversity between the families in the infectious environment.

Figshare2020-04-29 更新20

Alpha diversity indices at the 97% OTU level of groundwater and sediment samples with sequence number higher than 1248.

微生物群落多样性

生态学分析

*Coverage is the ratio of the observed OTUs to Chao1. Alpha diversity indices at the 97% OTU level of groundwater and sediment samples with sequence number higher than 1248.

NIAID Data Ecosystem10

The bacterial distribution of OTUS in the seasonal bacterial communities.

微生物群落多样性

季节性细菌分布

The eight most abundant bacterial classes (>1.0%) determined using an RDP confidence threshold of 0.7 were chosen. The bacterial distribution of OTUS in the seasonal bacterial communities.

NIAID Data Ecosystem40

Table1_Incorporation of Data From Multiple Hypervariable Regions when Analyzing Bacterial 16S rRNA Gene Sequencing Data.XLSX

细菌16SrRNA测序分析

微生物群落多样性

Short read 16 S rRNA amplicon sequencing is a common technique used in microbiome research. However, inaccuracies in estimated bacterial community composition can occur due to amplification bias of th

NIAID Data Ecosystem20

biofloc microbial community effected by organic carbon. biofloc metagenome

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