CPU and RAM usage of NOISYmputer, FSFHap and LB-Impute for three datasets based on the output of the seff command on the IFB cluster.
收藏Figshare2025-01-30 更新2026-04-28 收录
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https://figshare.com/articles/dataset/CPU_and_RAM_usage_of_NOISYmputer_FSFHap_and_LB-Impute_for_three_datasets_based_on_the_output_of_the_i_seff_i_command_on_the_IFB_cluster_/28315513
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NOISYmputer 1st and 2nd Runs are displayed as NOISYmputer shows better CPU time usage for the second run since the conversion of the raw VCF file has already been done. For LB-Impute, as imputation is processed in two steps, CPU time and execution time results are the sum of the two steps; RAM usage corresponds to the highest RAM usage of the two steps (offspring imputation). For the 84 PopSimul VCFs section, results correspond to the average of resource usage for each of the 84 PopSimul VCFs for an imputation half-window of 30 SNPs with NOISYmputer and the default window size (50) of FSFHap. All tests were conducted on the IFB Core cluster. *LB-Impute showed excessive time/RAM use so it could not be evaluated.
创建时间:
2025-01-30



