遇见数据集

Set of satDNA consensus sequences of Allium cepa and Allium fistulosum

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Zenodo2026-04-11 更新2026-05-26 收录
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This dataset contains the most complete collection of satellite DNA (satDNA) consensus sequences to date for two economically important Allium species: Allium cepa (onion) and Allium fistulosum (bunching onion). Using an ensemble bioinformatics approach applied to high-quality reference genome assemblies, we identified 83 satDNA families in A. cepa and 97 in A. fistulosum. The collection includes both previously characterized repeats and 128 novel species-specific families. The data are provided as FASTA files containing the consensus monomer sequences for each species. These libraries serve as a foundational resource for cytogenetic marker development, genome evolution studies, and the improvement of genome assembly annotations in these large, repeat-rich genomes.

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Zenodo
创建时间:
2026-03-09
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