FineMAV: Simulations

Simulated data describing allele frequency and CADD scores of genomic windows spanning 1000 SNPs under different selection scenarios (s=0; s=0.001; s=0.007; s=0.01; each 100 replicates). Selected variant is always in the middle of a window (rs500).<br>Parameters for migration rate were taken from Ryan N.Gutenkunst, 2009, dx.doi.org/10.1371/journal.pgen.1000695:Migration rate between Africa-Europe: 3*10-5Migration rate between Asia-Africa: 1.9*10-5Migration rate between Asia-Europe: 9.6*10-5<br>The selection started after populations split and lasted for 900 generations.Initial Ne for Africans, Europeans, East Asians: 10000, 5000, 4000Final Ne for Africans, Europeans, East Asians: 20000, 40000, 70000Sex ratio: 1:1<br>Mating model: random mating.<br>Mutation rate per marker: 1*10-8 per generation Selection model: additive