Supplementary Table S4.2.

Accessory genes associated with (A) high- and (B) low-level WGS-based genogroups, presenting simultaneously more than 80% sensitivity and specificity. Data was generated using Scoary v1.6.16 software. Gene/gene group ID refer to the one attributed during gene clustering by the Roary v3.13.0 software. Functional category description: C – Energy production and conversion; D – Cell cycle control, cell division, chromosome partitioning; E – Amino acid transport and metabolism; G – Carbohydrate transport and metabolism; H – Coenzyme transport and metabolism; I – Lipid transport and metabolism; J – Translation, ribosomal structure and biogenesis; K – Transcription; L – Replication, recombination and repair; M – Cell wall, membrane, envelope biogenesis; N – Cell motility; O – Posttranslational modification, protein turnover, chaperones; P – Inorganic ion transport and metabolism; Q – Secondary metabolites biosynthesis, transport and catabolism; R – General function prediction only; S – Function unknown; T – Signal transduction mechanisms; U – Intracellular trafficking, secretion, and vesicular transport; V – Defence mechanisms.