Additional file 3

Additional file 3 Table S1 - DyNet5 rewiring scores of TF-TG 1-to-1 edges when all five species networks are compared. Table S2 - List of candidate genes from previous molecular evolutionary and developmental studies2,6–8 potentially associated with phenotypic novelty in cichlids that overlap the six tissues we studied. Table S3 - DyNet5 rewiring scores of candidate genes in TF-TG 1-to-1 edges when all five species networks are compared. Table S4 - DyNet5 rewiring scores of TF-TG all edges when all five species networks are compared. Table S5 - DyNet5 rewiring scores of candidate genes in TF-TG all edges when all five species networks are compared. Table S6 – Rate of edge gain and loss in TF-TG all edges across the five cichlid phylogeny. Rates that are >100 (and excluded from analyses) are rank shaded blue (gain) and green (loss) whereas likelihood scores are rank shaded orange.