Ovis aries (Sheep Nov. 2015 Oar_v4.0)

High confidence set 547 tRNAs decoding standard 20 AA 546 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 212 Unexpected anticodons 11 Non-canonical anticodon loop length 4 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 226527 Secondary filter (low feature scores, possible rep. element) 29805 Tertiary filter (excessive isotype copies, possible rep. element) 430 Arg TCT 5 Leu CAA 6 Ile TAT 5 Met CAT 1 Tyr GTA 19 Isotype tRNA Count by Anticodon Total Ala AGC 29 GGC CGC 8 TGC 16 53 Gly ACC GCC 14 CCC 10 TCC 11 35 Pro AGG 12 GGG CGG 5 TGG 7 24 Thr AGT 10 GGT CGT 5 TGT 7 22 Val AAC 11 GAC CAC 10 TAC 5 26 Isotype tRNA Count by Anticodon Total Ser AGA 15 GGA CGA 4 TGA 4 ACT GCT 14 37 Arg ACG 9 GCG CCG 4 TCG 9 CCT 8 TCT 6 36 Leu AAG 10 GAG CAG 5 TAG 4 CAA 6 TAA 6 31 Isotype tRNA Count by Anticodon Total Phe AAA GAA 24 24 Asn ATT GTT 20 20 Lys CTT 22 TTT 23 45 Asp ATC GTC 13 13 Glu CTC 13 TTC 29 42 His ATG GTG 12 12 Gln CTG 12 TTG 7 19 Isotype tRNA Count by Anticodon Total Ile AAT 13 GAT 1 CAT TAT 5 19 iMet/Met CAT 14/17 31 Tyr ATA GTA 19 19 Supres TCA CTA TTA 0 Cys ACA GCA 28 28 Trp CCA 10 10 SelCys TCA 1 1